SBIR-STTR Award

Development of a Bio-tissue Oxygenation Nanophosphor Enabled Sensing (BONES) system for Quantifying Hypoxia in Bone Marrow
Award last edited on: 2/15/2024

Sponsored Program
STTR
Awarding Agency
NIH : NIGMS
Total Award Amount
$1,915,320
Award Phase
2
Solicitation Topic Code
859
Principal Investigator
Wenbing Yun

Company Information

Sigray Inc

5750 Imhoff Drive Suite I
Concord, CA 94520
   (925) 949-6958
   N/A
   www.sigray.com

Research Institution

University of California - Merced

Phase I

Contract Number: 1R42GM142394-01A1
Start Date: 6/1/2021    Completed: 11/30/2021
Phase I year
2021
Phase I Amount
$252,113
Low oxygen (hypoxic) environments are known to be important for maintaining the small number of adult stem cells in the human body, such as in bone marrow. These conditions are also believed to enable dormant cancer cells to survive and metastasize years or decades after the original tumor has been destroyed and the reason why bone marrow is one of the most common sites of cancer metastasis. Understanding of these conditions can drive the development of 3D cellular scaffolds for growing stem cells ex vivo, thus reducing the burden on requiring bone marrow transplants, and for developing therapeutics that prevent cancer relapse. This project proposes to develop the first quantitative oxygen tomographic imaging system called BONES (Bio-tissue Oxygenation Nanophosphor Enabled Sensing) to address the critical need for high resolution imaging of oxygen concentrations in hypoxic (low oxygen) tissues such as bone marrow. The technique is based on developments in x-ray luminescence computed tomography, an emerging molecular imaging technique capable of achieving cellular level resolution and high sensitivities. The approach uses x-rays to excite oxygen-sensitive nanophosphors that emit near-infrared photons to finally enable 3D oxygen measurements in deep bone marrow. Because the technique requires a multidisciplinary team with x-ray expertise, nanophosphor expertise, near-infrared detection expertise, and algorithms for quantifying the concentrations and minimizing dose, this STTR fast-track proposal involves several institutions with deep expertise in their respective domains. The proposed Phase I 6-month project is a proof-of- principle demonstration of a breadboard system used on nanophosphors in low oxygen solutions and embedded in bone. The proposed Phase II 24-month project is to develop a complete prototype system and experimentally verify its performance.

Public Health Relevance Statement:
Project Narrative This project proposes to develop the first quantitative oxygen tomographic imaging system called BONES (Bio-tissue Oxygenation Nanophosphor Enabled Sensing) to address the critical need for high resolution imaging of oxygen concentrations in hypoxic (low oxygen) tissues such as bone marrow. Local oxygen microenvironments and changes to oxygen tensions over only tens of micrometers are known to be important for maintaining stem cell growth and are suspected to also enable cancer metastases, but are poorly understood because there are no methods with the resolution and sensitivity required. The proposed solution will finally enable 3D oxygen measurements in deep bone marrow based on a newly developed technique called x- ray luminescence computed tomography (XLCT) and oxygen-sensitive nanophosphors for 10 to 100 µm imaging of oxygen concentrations.

Project Terms:
Affect; Algorithms; Biomedical Research; Biopsy; Blood; Blood Reticuloendothelial System; bone; Bone Marrow; Bone Marrow Reticuloendothelial System; Bone Marrow Transplantation; Bone Marrow Grafting; Bone Marrow Transplant; Marrow Transplantation; malignant breast neoplasm; Breast Cancer; malignant breast tumor; Malignant Neoplasms; Cancers; Malignant Tumor; malignancy; neoplasm/cancer; Cells; Cell Body; Disease; Disorder; Environment; Heterogeneity; image reconstruction; image construction; image generation; Chronic Kidney Failure; Chronic Renal Disease; Chronic Renal Failure; chronic kidney disease; Light; Photoradiation; luminescence; Magnetic Resonance Imaging; MR Imaging; MR Tomography; MRI; Medical Imaging, Magnetic Resonance / Nuclear Magnetic Resonance; NMR Imaging; NMR Tomography; Nuclear Magnetic Resonance Imaging; Zeugmatography; Methods; Microscopy; Neoplasm Metastasis; Metastasis; Metastasize; Metastatic Lesion; Metastatic Mass; Metastatic Neoplasm; Metastatic Tumor; Secondary Neoplasm; Secondary Tumor; cancer metastasis; tumor cell metastasis; Noise; Organ Transplantation; Grafting Procedure; Organ Transplants; organ allograft; organ graft; organ xenograft; Oxygen; O element; O2 element; phosphorescence; Production; Signal Transduction; Cell Communication and Signaling; Cell Signaling; Intracellular Communication and Signaling; Signal Transduction Systems; Signaling; biological signal transduction; stem cells; Progenitor Cells; Time; Tissues; Body Tissues; tomography; X-Ray Computed Tomography; CAT scan; CT X Ray; CT Xray; CT imaging; CT scan; Computed Tomography; Tomodensitometry; X-Ray CAT Scan; X-Ray Computerized Tomography; Xray CAT scan; Xray Computed Tomography; Xray computerized tomography; catscan; computed axial tomography; computer tomography; computerized axial tomography; computerized tomography; Roentgen Rays; X-Radiation; X-Ray Radiation; X-ray; Xray; Imaging Techniques; Imaging Procedures; Imaging Technics; Measures; Film; Photons; Metastatic Neoplasm to the Bone; Bone Metastasis; Bone cancer metastatic; Bony metastasis; Metastasis to bone; Metastatic Cancer to the Bone; Metastatic Tumor to the Bone; Metastatic malignant neoplasm to bone; Osseous metastasis; Secondary cancer of bone; Secondary malignancy of bone; Secondary malignant neoplasm of bone; Skeletal metastasis; bone neoplasm secondary; base; image processing; detector; improved; Site; Area; Surface; Clinical; Penetration; Phase; Chemicals; Fiber; insight; Hypoxia; Hypoxic; Oxygen Deficiency; Visible Radiation; Visible Light; Visible Light Radiation; Measurement; Human body; Human Figure; Collaborations; Therapeutic; Morphology; Malignant Cell; cancer cell; scaffolding; scaffold; Nature; Malignant Tumor of the Prostate; Malignant prostatic tumor; Prostate CA; Prostate Cancer; Prostatic Cancer; Malignant neoplasm of prostate; Scanning; Techniques; System; 3-D; 3D; three dimensional; 3-Dimensional; Radiation Dose; Radiation Dose Unit; Performance; Spatial Design; Modality; Cancer Relapse; design and construct; design and construction; Sampling; response; tissue oxygen saturation; tissue oxygenation; cancer location; cancer site; adult stem cell; Institution; Thickness; Thick; preventing; prevent; Address; Dose; Data; Detection; Resolution; Cancer Patient; Small Business Technology Transfer Research; STTR; Monitor; transmission process; Transmission; Molecular; Development; developmental; molecular imaging; molecule imaging; Image; imaging; pre-clinical; preclinical; two-photon; 2-photon; quantum; therapeutic effectiveness; multidisciplinary; prototype; tumor; imaging system; high resolution imaging; deep learning; denoising; de-noising; deep learning algorithm; stem cell growth; progenitor Cell growth

Phase II

Contract Number: 4R42GM142394-02
Start Date: 6/1/2021    Completed: 2/29/2024
Phase II year
2022
(last award dollars: 2023)
Phase II Amount
$1,663,207

Low oxygen (hypoxic) environments are known to be important for maintaining the small number of adult stem cells in the human body, such as in bone marrow. These conditions are also believed to enable dormant cancer cells to survive and metastasize years or decades after the original tumor has been destroyed and the reason why bone marrow is one of the most common sites of cancer metastasis. Understanding of these conditions can drive the development of 3D cellular scaffolds for growing stem cells ex vivo, thus reducing the burden on requiring bone marrow transplants, and for developing therapeutics that prevent cancer relapse. This project proposes to develop the first quantitative oxygen tomographic imaging system called BONES (Bio-tissue Oxygenation Nanophosphor Enabled Sensing) to address the critical need for high resolution imaging of oxygen concentrations in hypoxic (low oxygen) tissues such as bone marrow. The technique is based on developments in x-ray luminescence computed tomography, an emerging molecular imaging technique capable of achieving cellular level resolution and high sensitivities. The approach uses x-rays to excite oxygen-sensitive nanophosphors that emit near-infrared photons to finally enable 3D oxygen measurements in deep bone marrow. Because the technique requires a multidisciplinary team with x-ray expertise, nanophosphor expertise, near-infrared detection expertise, and algorithms for quantifying the concentrations and minimizing dose, this STTR fast-track proposal involves several institutions with deep expertise in their respective domains. The proposed Phase I 6-month project is a proof-of- principle demonstration of a breadboard system used on nanophosphors in low oxygen solutions and embedded in bone. The proposed Phase II 24-month project is to develop a complete prototype system and experimentally verify its performance.

Public Health Relevance Statement:
Project Narrative This project proposes to develop the first quantitative oxygen tomographic imaging system called BONES (Bio-tissue Oxygenation Nanophosphor Enabled Sensing) to address the critical need for high resolution imaging of oxygen concentrations in hypoxic (low oxygen) tissues such as bone marrow. Local oxygen microenvironments and changes to oxygen tensions over only tens of micrometers are known to be important for maintaining stem cell growth and are suspected to also enable cancer metastases, but are poorly understood because there are no methods with the resolution and sensitivity required. The proposed solution will finally enable 3D oxygen measurements in deep bone marrow based on a newly developed technique called x- ray luminescence computed tomography (XLCT) and oxygen-sensitive nanophosphors for 10 to 100 µm imaging of oxygen concentrations.

Project Terms:
Affect; Algorithms; Biomedical Research; Biopsy; Blood Vessels; vascular; bone; Bone Marrow; Bone Marrow Reticuloendothelial System; Bone Marrow Transplantation; Bone Marrow Grafting; Bone Marrow Transplant; Marrow Transplantation; malignant breast neoplasm; Breast Cancer; malignant breast tumor; Malignant Neoplasms; Cancers; Malignant Tumor; malignancy; neoplasm/cancer; Cells; Cell Body; Disease; Disorder; Environment; Heterogeneity; image reconstruction; image construction; image generation; Chronic Kidney Failure; Chronic Renal Disease; Chronic Renal Failure; chronic kidney disease; Light; Photoradiation; luminescence; Magnetic Resonance Imaging; MR Imaging; MR Tomography; MRI; MRIs; Medical Imaging, Magnetic Resonance / Nuclear Magnetic Resonance; NMR Imaging; NMR Tomography; Nuclear Magnetic Resonance Imaging; Zeugmatography; Methods; Microscopy; Metastasis; Metastasize; Metastatic Lesion; Metastatic Mass; Metastatic Neoplasm; Metastatic Tumor; Secondary Neoplasm; Secondary Tumor; cancer metastasis; tumor cell metastasis; Neoplasm Metastasis; Noise; Grafting Procedure; Organ Transplants; organ allograft; organ graft; organ xenograft; Organ Transplantation; O element; O2 element; Oxygen; phosphorescence; Production; Cell Communication and Signaling; Cell Signaling; Intracellular Communication and Signaling; Signal Transduction Systems; Signaling; biological signal transduction; Signal Transduction; Progenitor Cells; stem cells; Time; Tissues; Body Tissues; tomography; X-Ray Computed Tomography; CAT scan; CT X Ray; CT Xray; CT imaging; CT scan; Computed Tomography; Tomodensitometry; X-Ray CAT Scan; X-Ray Computerized Tomography; Xray CAT scan; Xray Computed Tomography; Xray computerized tomography; catscan; computed axial tomography; computer tomography; computerized axial tomography; computerized tomography; non-contrast CT; noncontrast CT; noncontrast computed tomography; Roentgen Rays; X-Radiation; X-Ray Radiation; X-ray; Xray; Imaging Techniques; Imaging Procedures; Imaging Technics; Measures; Film; Photons; Metastatic Neoplasm to the Bone; Bone Metastasis; Bone cancer metastatic; Bony metastasis; Metastasis to bone; Metastatic Cancer to the Bone; Metastatic Tumor to the Bone; Metastatic malignant neoplasm to bone; Osseous metastasis; Secondary cancer of bone; Secondary malignancy of bone; Secondary malignant neoplasm of bone; Skeletal metastasis; bone neoplasm secondary; base; image processing; detector; improved; Site; Area; Surface; Clinical; Penetration; Phase; Chemicals; Fiber; insight; Hypoxic; Oxygen Deficiency; Hypoxia; Visible Light; Visible Light Radiation; Visible Radiation; Measurement; Human Figure; Human body; Collaborations; Therapeutic; Morphology; Malignant Cell; cancer cell; scaffolding; scaffold; Nature; Malignant Tumor of the Prostate; Malignant prostatic tumor; Prostate CA; Prostate Cancer; Prostatic Cancer; Malignant neoplasm of prostate; Scanning; Techniques; System; 3-D; 3D; three dimensional; 3-Dimensional; Radiation Dose; Radiation Dose Unit; Performance; Spatial Design; Modality; Cancer Relapse; design and construct; design and construction; Sampling; response; tissue oxygen saturation; tissue oxygenation; cancer location; cancer site; adult stem cell; Institution; Thickness; Thick; preventing; prevent; Address; Dose; Data; Detection; Resolution; Cancer Patient; Small Business Technology Transfer Research; STTR; Monitor; transmission process; Transmission; Molecular; Development; developmental; molecular imaging; molecule imaging; Image; imaging; pre-clinical; preclinical; two-photon; 2-photon; quantum; therapeutic effectiveness; multidisciplinary; prototype; tumor; imaging system; high resolution imaging; deep learning; denoising; de-noising; deep learning algorithm; stem cell growth; progenitor Cell growth; nanophosphor