Biomass is a renewable resource with high potential to achieve cost effective, reliable, and environmentally friendly energy to the American consumer, but yet is still deemed inefficient. First, current methodologies only allow conversion of cellulosic materials into biofuel, leaving energy-rich hemicellulosic material unutilized. Second, even though carbohydrate conversion is the focus of biomass processing, currently there exists no reliable online carbohydrate monitor. As a result, biomass conversion commonly shows 35% relative standard deviation yields batch-to-batch because of variations in raw materials and processing conditions. Here, Advanced MicroLabs (AML) will construct an online carbohydrate proof-of-concept monitoring device, based on a patent-pending microchip capillary electrophoresis coupled with electrochemical detection technology. AML will team with both the National Renewable Energy Laboratory (NREL, Golden, CO) and the Henry Laboratory at Colorado State University. NREL operates a next generation cellulosic/hemicellulosic pilot plant and is eager to find an online monitor that can provide feedback for efficient processing. NREL has identified a sensor that monitors glucose and xylose concentrations during processing as a high priority and will be the focus of this proposal. The Henry Lab authored the provisional patent and recently demonstrated resolution and sensitive detection of both glucose and xylose in model solutions using the technology. In this project, the Henry Lab will develop the conditions necessary to resolve glucose and xylose within real pilot plant samples provided by NREL. We conservatively estimate online monitoring would save the current cellulosic bioethanol industry $55 million/yr. with even greater savings in the future cellulosic/hemicellulosic industry. OBJECTIVES: Specific Aim 1: Construct a microchip analysis system for the separation and detection of the fermentable sugars, glucose and xylose, from a saccharification sample. Using model solutions, the Henry Group has demonstrated resolution and detection of glucose and xylose. Here, the Henry Group will transition this to a more complex saccharification sample. This will require the ability to separate carbohydrates based on their charge and hydrodynamic radius and will be achieved using microchip capillary zone electrophoresis. Because this project is focused on glucose and xylose, no attempt will be made to individually resolve other components of the saccharification process, i.e., amines, thiols, etc, although these will be analyzed as possible interferences. Specific Aim 2: Construct a proof-of-concept device capable of automated sampling of carbohydrates during the saccharification process. AML will leverage its prior experience in the design and construction of microchip instrumentation to construct an instrument specific to this application. Additionally, AML will address a notable development hurdle for online sampling, namely the design of a fluidic system necessary for reliable and long term saccharification sampling. Saccharification samples are complex and contain not only carbohydrates but also some small molecules as well as particulate matter. Again leveraging from prior experience, AML will develop the necessary pumps and filters to reliably deliver sample to the microchip for analysis