SBIR-STTR Award

The Development of a Resonant Scanning MMM system for high resolution 3D CNS imaging
Award last edited on: 3/3/2021

Sponsored Program
SBIR
Awarding Agency
NIH : NIMHD
Total Award Amount
$3,161,172
Award Phase
2
Solicitation Topic Code
101
Principal Investigator
Yan Seng Elijah Yew

Company Information

TissueVision Inc

519 Somerville Avenue Suite 311
Somerville, MA 02143
   (617) 718-0799
   info@tissuevision.com
   www.tissuevision.com
Location: Single
Congr. District: 07
County: Middlesex

Phase I

Contract Number: 1R43MH115635-01
Start Date: 9/15/2017    Completed: 8/31/2019
Phase I year
2017
Phase I Amount
$533,312
Central Nervous System disorders have proven to be among the most difficult of diseases to treat and have placed an enormous burden on society. A major contributing factor to this situation is that currently we often cannot distinguish between normal and pathological states since we do not possess even a basic 'ground truth' map of how neurons and other cells are arranged at the nanoscale level for representative pieces of neuronal tissue. Extensive efforts are underway to build these fine scale structural maps of mammalian brains with the hope that these will lead to an understanding of the how brain ultimately functions and how best to target therapeutics. However the problem is immense as a single cubic mm of brain tissue contains about 100,000 neurons and roughly a billion synaptic connections. The overwhelming majority of these structural details are too small to be resolved with even the best optical microscopes and current super resolution approaches lack the necessary throughput. We propose to meet this challenge by developing an ultra-high speed Serial Two-Photon Tomography system that combines high speed resonant scanning with TissueVision's novel multi-focal microscopy and which will be able to quickly image 3D volumes of neuronal tissue with sub-micron resolution. With our collaborators at MIT in the Ed Boyden group, we will apply this system to study the CNS cytoarchitecture at the nanoscopic level by using a new technique the Boyden lab has developed called Expansion Microscopy (ExM) that physically expands tissue up to 20-fold to provide an effective nanoscale (~25nm) view into the structure of macroscopic portions of the CNS. For this project, we have put together a world class team of experts from TissueVision and MIT who have deep expertise with optics and neuroscience as well as a successful track record of commercializing biomedical imaging systems for the neuroscience market. While our focus here is on nanoscale imaging of CNS tissues, the device we will develop will represent a major tool for a variety of brain mapping efforts including whole brain neuronal circuit analysis and mesoscale mapping efforts.

Public Health Relevance Statement:
PROJECT NARRATIVE This proposal is to build a novel ultra-high speed resonant scanning Serial Two-Photon Tomography system that combines resonant scanning with TissueVision's multi-focal multiphoton microscopy technology. We will demonstrate its utility by applying it to nanoscale reconstructions of CNS tissues at a 25 nm effective resolution. It will offer the highest speed for sub-micron 3D brain imaging and have broad utility for applications in neuroscience including brain mapping, neuronal circuit analysis and mesoscale connectivity.

Project Terms:
Address; base; bioimaging; Brain; Brain imaging; Brain Mapping; brain tissue; Cells; Central Nervous System Diseases; commercialization; computerized data processing; Custom; Data; data acquisition; Data Storage and Retrieval; design; design and construction; Detection; Development; Devices; Disease; Dyes; Electronics; experience; flexibility; Frequencies; high resolution imaging; Histocompatibility; Human; Image; imaging platform; imaging system; Individual; instrument; Lasers; Light; Maps; Microscope; Microscopy; nanoscale; Nature; neuronal circuitry; Neurons; Neurosciences; novel; Optics; Pathologic; Phenotype; Photobleaching; Polymers; Price; Process; reconstruction; Research; Resolution; Sampling; Scanning; Societies; Speed; Structure; submicron; Synapses; System; targeted treatment; Techniques; Technology; terabyte; Testing; Time; Tissue Sample; Tissues; tomography; tool; two-photon; Work

Phase II

Contract Number: 5R43MH115635-02
Start Date: 9/15/2017    Completed: 8/31/2019
Phase II year
2018
(last award dollars: 2020)
Phase II Amount
$2,627,860

Central Nervous System disorders have proven to be among the most difficult of diseases to treat and have placed an enormous burden on society. A major contributing factor to this situation is that currently we often cannot distinguish between normal and pathological states since we do not possess even a basic 'ground truth' map of how neurons and other cells are arranged at the nanoscale level for representative pieces of neuronal tissue. Extensive efforts are underway to build these fine scale structural maps of mammalian brains with the hope that these will lead to an understanding of the how brain ultimately functions and how best to target therapeutics. However the problem is immense as a single cubic mm of brain tissue contains about 100,000 neurons and roughly a billion synaptic connections. The overwhelming majority of these structural details are too small to be resolved with even the best optical microscopes and current super resolution approaches lack the necessary throughput. We propose to meet this challenge by developing an ultra-high speed Serial Two-Photon Tomography system that combines high speed resonant scanning with TissueVision's novel multi-focal microscopy and which will be able to quickly image 3D volumes of neuronal tissue with sub-micron resolution. With our collaborators at MIT in the Ed Boyden group, we will apply this system to study the CNS cytoarchitecture at the nanoscopic level by using a new technique the Boyden lab has developed called Expansion Microscopy (ExM) that physically expands tissue up to 20-fold to provide an effective nanoscale (~25nm) view into the structure of macroscopic portions of the CNS. For this project, we have put together a world class team of experts from TissueVision and MIT who have deep expertise with optics and neuroscience as well as a successful track record of commercializing biomedical imaging systems for the neuroscience market. While our focus here is on nanoscale imaging of CNS tissues, the device we will develop will represent a major tool for a variety of brain mapping efforts including whole brain neuronal circuit analysis and mesoscale mapping efforts.

Thesaurus Terms:
Address; Base; Bioimaging; Brain; Brain Imaging; Brain Mapping; Brain Tissue; Cells; Central Nervous System Diseases; Commercialization; Computerized Data Processing; Custom; Data; Data Acquisition; Data Storage And Retrieval; Design; Design And Construction; Detection; Development; Devices; Disease; Dyes; Electronics; Experience; Flexibility; Frequencies; High Resolution Imaging; Histocompatibility; Human; Image; Imaging Platform; Imaging System; Individual; Instrument; Lasers; Light; Maps; Microscope; Microscopy; Nanoscale; Nature; Neuronal Circuitry; Neurons; Neurosciences; Novel; Optics; Pathologic; Phenotype; Photobleaching; Polymers; Price; Process; Reconstruction; Research; Resolution; Sampling; Scanning; Societies; Speed; Structure; Submicron; Synapses; System; Targeted Treatment; Techniques; Technology; Terabyte; Testing; Time; Tissue Sample; Tissues; Tomography; Tool; Two-Photon; Work;